Welcome to the research applications portal. Here you can find templates for web applications and lab pages, reproducible environments for on and off of a compute cluster, and software to help with your research.

    PEFinder: Container Based Classification of Pulmonary Embolism

    An example clinical application - classification of Pulmonary Embolism from radiology reports using containers

    Container Based Reproducible Analysis for SLURM

    This recipe will walk through the steps to turn a Python script into a container, and then run on a SLURM cluster

    An Introduction to Python Packages

    Want to properly publish your Python code? You should make a package for pypi.

    Recipe: Experiment Factory for Stanford

    Deploying a local experiment with a MySQL database on AFS

    RedDocs Researcher Documentation

    Template for lab and code documentation, easily deployed to github pages.